There are 5 special episodes where you get to be someone different in the game.
|Episode 1: Bidoof's wish||Beat Chapter 3. In this episode, you will play as Bidoof (of course). Bidoof will go with a "friend" to Star Cave but is tricked and has to defeat his "friend" and his "friend's" friends. He then gets help from Wigglytuff and the guild and goes through the rest of the cave to find Jirachi.|
|Episode 2: Igglybuff the Prodigy||Beat Chapter 9. In this episode, you will play as Igglypuff (which was Wigglytuff as a child). He will find a friend to explore with and find treasure until his friends and family find out his friend is an outlaw.|
|Episode 3: Today's "Oh My Gosh"||Beat Chapter 13. In this episode, you will play as Sunflora. She'll get asked by the guild to take down an outlaw known as Haunter through a firey cave, but realizes that the outlaw is "invisible". She won't give up and follows him until she finds out that Haunter isn't invinsible and gets help from Loudred and defeats Haunter.|
|Episode 4: Here Comes Team Charm!||Beat Chapter 16. In this episode, you will play as Lopunny. Her and her team travel through many dungeons and get all the treasure they desire. They travel to a dungeon that is said to have a great treasure inside, but when they get there, they meet with Weavile's team and get in a fight to see who'll get the treasure first. Weavile and the rest of her team challenge Team Charm to see who'll get the treasure first, but when they get to the end of the dungeon, they realize that the treasure was a time gear and a ditto was trying to guard it.|
|Episode 5: In the Future of Darkness||Defeat Dialga. In this episode, you will play as Grovyle. After Grovyle takes Dusknoir back to the future, he decides to go and stall Dialga so the two pokemon trying to stop Temporal Tower from falling. He goes through a dungeon and sees that Dusknoir was following him. Then a bunch of Sableye appear and attack both Grovyle and Dusknoir. Dusknoir decides to go with Grovyle to find out why the Sableyes attacked him. They go to Temporal Tower but see that Dialga isn't there. Dusknoir said that Dialga must've went to capture Celebi. Then Grovyle and Dusknoir travel through many dungeons to find Celebi, and finally find her trapped by a Spiritomb. Grovyle tries saving her, but finds out it was just a trap created by Dusknoir. His spirit starts getting sucked away, but before it was gone, Dusknoir saved him. Then Dialga appears and attacks Dusknoir for what he did, but then suddenly time starts flowing, and Dialga and everyone else disappears. Then, after everyone "disappeared", Grovyle realized that something happened, and all the pokemon in the future were saved.|