[Mission 1 - Police Station]
Keypad #1: 091772
Keypad #2: 5929

[Mission 4 - CIA HQ]
Keypad #1: 7687
Keypad #2: 110598
Keypad #3: 2019
Keypad #4: 110700
Keypad #5: 0614 (if Dougherty gets through the door before you can)

[Mission 5 - Kalinatek]
Keypad #1: 97531
Keypad #2: 33575
Keypad #3: 1250

[Mission 8 - Chinese Embassy, Part II]
Keypad #1: 1436
Keypad #2: 9753
Keypad #3: 1456
Keypad #4: 1834
Keypad #5: 7921

[Mission 9 - Presidential Palace]
Keypad #1: 2126
Keypad #2: 70021
Keypad #3: 66768